CDS

Accession Number TCMCG015C57540
gbkey CDS
Protein Id XP_027091383.1
Location complement(join(16308482..16308661,16308747..16308809,16309620..16309725,16309871..16309965,16310061..16310090,16311855..16311926,16312239..16312298,16313328..16313374,16314270..16314334,16314818..16314906,16315194..16315232,16315436..16315495,16317464..16317536,16319012..16319193,16320022..16320102,16321152..16321277,16321448..16321545,16323254..16323377,16324595..16324739,16325581..16325758,16326927..16327000,16328701..16328860,16328945..16329149))
Gene LOC113712253
GeneID 113712253
Organism Coffea arabica

Protein

Length 783aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027235582.1
Definition U3 small nucleolar RNA-associated protein 25-like isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAAACCAGGATTTGCAAGAAAAAGAGGTAAAATTTCCTTTAGTTTGCTTCGTAATGTTCGTTTATACTTATTAATAGGTACATCGTATATAGGATTGAAGAGAGTGAACAGTTCAAAGCCATTTAAGAAGTTCAAAAATCTGAAGCTAAATCCTGGAGCAGAAAAACTTGTACCTAAGCAACCTCTAGAAAATGACTCAGAGGATTGGTCTGATGAAAATTCTGAGGCTGAATTAGAAACCAAAGAAGAAGAAGAAGTAGAAGAGGATATTGTTTTTAACAGAAAGCCAACAATGTATGACAATTTATTGAAGAGGTTGGGATCAAGTAGTCAATTAATTGCAAATGCGATTAAGCAAAGAAAAAGAGGAGAAGAAGGGAAAAGTGATACAGAAGATGATGAATCAGAAAGTGAGGTTGAAGATGACAATGAAGGGAGTATTGATGAGTGTCCTAGAAGAATTGAAATGATAAATGGTGCCAAAGAAAGTGGTGTGCCGGGTTCTACAGAAAAGAGTGAAGATTCTGGATCAGATGATGGAGAGATTGGTGCCTCTGACTCAGACGAAGAACATGATTCGAGAACAAATGTTGAATCCATTACCAGCAGAAGTACATTCAGCAGTCACTTGGATTATAAATTATCTCAAGGAGAGGTTGACAACTTATTCAAGAGGAAATGGAATTACAAATGGGAAGTTCCTGCTCTTCGTGCACCCAATTGCAAGTGGAGAGGAACTGGAGACTGTTTTTTGAAGGACATTGACATGAATGAAATGTGTGGCCTCAAGCCAAGATTGTATAAGCATTGGGTAGATGTCTACCAAGGATCTGGCGGCACTGATTTTCAATCATCTGAGCAGAGATTCTTTTTCTCCATCTGCAACAGCTATCGGGATGTATTACACCATAACAAGAAGCCTTTTTATCTTAAAGGTCAAGAGGACTCGAGTATCCTGGATGCTTATGTTTTGCACACTTTAAATCATGTTTTGAGAACAAGGGATTTGATCAGTAAAAATGATGCAAAAGTGGCTGATGCTCAAGGACAAGGGGGCATTCTCAATGGTGATGGTTTCCTGGACCATGGGTTTACTCGTCCTAAGGTCTTGATCCTTTTGCCTTTAGCAAGCATTGCATTTTGGGTAGTAAAGAGGTTGATCCAGTTAACCCCTTCAAAGCATAAGGTTAATATTGAACACATGGATCGCTTTACTGAGGAGTTTGGGAGTGGAGGAGTTGAAAGTGAGGAGGAGGATGAGGATGTTGAGAACTCAAAAAGAAAGAAGTCCTCTAAACCTTCTGACTTTCAGTCATTGTTTGGTGGGAATAACAATGATCATTTCATGATAGGCATCAAGTATATGGGGAGGAAGATCAAGTTATATGCTGATTTTTATTCCTCAGACATAATAGTTGCTTCCCCTCTTGGTTTGATCACTAAAATTGGCGCGGCAGAAGTAGAGAAAGAAAAGGATATTGATTATCTTTCCTCCATAGAGGTTTTGATTATTGACCACGCAGATGTCATACTAATGCAGAATTGGTCTCATGTGAACACAGTAGTTGAACAATTAAACCGGTTACCTGTGAAGCAGCATGGAACTGATATAATGCGCATACGACCATGGTACCTAGATGGACAAGCGCAATTCTATCGACAAACAATAATTCTAGGTTCTCACTTAAACCCAGACATCAATTCACTGTTCAATCGGCACTGCCTTAACTACGAGGGAAAGGTCAAGTTGGTGTGCCTTTATAAAGGTGTTCTTCCAAAAGTATTGATCCCTGTACGGCAGATATACGAGCGGTTTGAAGCAGACTCGATTGCAGATGCTGATGATGCTCGTTTCCAGTATTTTTGTAAGAAGGTGTTTCCCAAAATAAAAGACTCTATCCAGGGTGGAATTATGCTATGTATTAGTTCTTATTTCGAGTTTGTTCGACTCCGAAATTTTTTGAAATCTCAAGAAGCATCGTTCTGCCTTCTTGGAGAGTACACCAAACAAAGTGATATATCTCGTGGGCGAGTTTGGTTCTTCCAAGGACAGCGGAAAATCATGCTATACACTGAGAGAGCTCACTTCTACCACAGATACAAGATCCATGCTATTCAGAAATTGATCATTTATTCTCTTCCGGAGAGGAAAGAATTTTACCCTGAGATAGTAAATATGCTCGAAGGATCTCAAAACATGTCTTGTACCGTGCTATTTTCTCGTTTTGATCAGTTCCGGGTAAGATCTTTTCGAGCATGCACTGAAATGAAAGTGTCCCTTGAAAATTTTCTATTCTTATTCTCTCTGATAGGTTTCTTTAGAATAGACAAAGTTCATAGAGATTGA
Protein:  
MGKPGFARKRGKISFSLLRNVRLYLLIGTSYIGLKRVNSSKPFKKFKNLKLNPGAEKLVPKQPLENDSEDWSDENSEAELETKEEEEVEEDIVFNRKPTMYDNLLKRLGSSSQLIANAIKQRKRGEEGKSDTEDDESESEVEDDNEGSIDECPRRIEMINGAKESGVPGSTEKSEDSGSDDGEIGASDSDEEHDSRTNVESITSRSTFSSHLDYKLSQGEVDNLFKRKWNYKWEVPALRAPNCKWRGTGDCFLKDIDMNEMCGLKPRLYKHWVDVYQGSGGTDFQSSEQRFFFSICNSYRDVLHHNKKPFYLKGQEDSSILDAYVLHTLNHVLRTRDLISKNDAKVADAQGQGGILNGDGFLDHGFTRPKVLILLPLASIAFWVVKRLIQLTPSKHKVNIEHMDRFTEEFGSGGVESEEEDEDVENSKRKKSSKPSDFQSLFGGNNNDHFMIGIKYMGRKIKLYADFYSSDIIVASPLGLITKIGAAEVEKEKDIDYLSSIEVLIIDHADVILMQNWSHVNTVVEQLNRLPVKQHGTDIMRIRPWYLDGQAQFYRQTIILGSHLNPDINSLFNRHCLNYEGKVKLVCLYKGVLPKVLIPVRQIYERFEADSIADADDARFQYFCKKVFPKIKDSIQGGIMLCISSYFEFVRLRNFLKSQEASFCLLGEYTKQSDISRGRVWFFQGQRKIMLYTERAHFYHRYKIHAIQKLIIYSLPERKEFYPEIVNMLEGSQNMSCTVLFSRFDQFRVRSFRACTEMKVSLENFLFLFSLIGFFRIDKVHRD